Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs77112519 chr2:3225259 T/G 7.89E-5 107 0 16.3 15.17 KM Plot
LAML rs77118652 chr11:34288980 A/C 0.000145 111 14.18 15.77 0 KM Plot
LAML rs77209628 chr20:61606731 G/A 0.000183 108 11.67 20.27 0 KM Plot
LAML rs77236056 chr5:25941720 C/A 0.000145 111 15.17 16.17 0 KM Plot
LAML rs77315387 chr13:100087304 TTTTTTA/T 5.58E-5 111 17.23 10.67 1.02 KM Plot
LAML rs77369148 chr1:95377678 A/T 7.14E-5 110 12.65 23.3 0 KM Plot
LAML rs7739679 chr6:127545428 G/A 2.57E-5 110 0.98 16.27 15.2 KM Plot
LAML rs7745944 chr6:127709574 A/G 1.9E-5 110 0.98 16.23 15.17 KM Plot
LAML rs7752238 chr6:127667069 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs7753913 chr6:127671296 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs7754038 chr6:34505194 T/G 0.000184 109 16.23 9.13 0 KM Plot
LAML rs7755102 chr6:10293127 G/A 0.000167 109 16.17 15.17 0 KM Plot
LAML rs7756336 chr6:127650299 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs7756880 chr6:127683999 A/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs7756884 chr6:127684018 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot